Virology.ca Tools
Here is a list of our tools as well as a brief description.
If you like what we do please donate.
 VOCS – search and extract genome, gene and protein data from the database. |
 VGO – an easy-to-use Java genome browser. |
 Base By Base – search and extract genome, gene and protein data from the database. |
JDotter – generate dot-plots for large genome or protein sequences |
 Sequence Searcher – search for protein and DNA motifs |
 GATU (Genome Annotation Transfer Utility) - annotates a genome based on closely related reference genomes |
 STS – Java program for building and exploring indexes of small or large amounts of DNA data. |
 NAP (Nucleotide Amino Acid Alignment) – global DNA/protein alignments without penalizing terminal gaps |
 GFS (Genome-based Fingerprint Scanning) – maps peptide mass fingerprint data into raw genomic sequences |
 GraphDNA – DNA Skew Graphing |
 CodonStatistics – browse statistical information on one or more genomes |
 Hydrophobicity – graph amino acid hydrophobicity/hydrophilicity |
eGATU – allows users to transfer annotations to an input genome without having to specify a reference |
JFreq (Java Word Frequences) – finds frequencies of short nucleotide sequences |